Interested in working on the development of this resource? Apply here.

6:29910623 A / T


Filter Status
PASS
dbSNP
rs142783227
Allele Frequency
0.0006995
Filtering AF
0.005042 (African)
Allele Count
84 / 120094
UCSC
6-29910623-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9 65886 0 0.0001366
East Asian 0 8606 0 0
Other 0 892 0 0
African 64 10200 0 0.006275
Latino 11 11474 0 0.0009587
South Asian 0 16494 0 0
European (Finnish) 0 6542 0 0
Total 84 120094 0 0.0006995

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.