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6:29911098 T / C


Filter Status
PASS
dbSNP
rs1059488
Allele Frequency
0.04237
Filtering AF
0.08226 (African)
Allele Count
4523 / 106738
UCSC
6-29911098-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2521 57700 229 0.04369
East Asian 47 7818 6 0.006012
Other 48 812 4 0.05911
African 736 8412 84 0.08749
Latino 258 10092 24 0.02556
South Asian 636 16154 45 0.03937
European (Finnish) 277 5750 38 0.04817
Total 4523 106738 430 0.04237

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.