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6:29911227 G / T

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
VQSRTrancheINDEL99.00to99.50
dbSNP
rs1059537
Allele Frequency
0.01685
Filtering AF
0.06098 (African)
Allele Count
1926 / 114272
UCSC
6-29911227-G-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 761 62196 9 0.01224
East Asian 162 8356 2 0.01939
Other 6 844 0 0.007109
African 576 8808 31 0.0654
Latino 153 11352 2 0.01348
South Asian 258 16262 2 0.01587
European (Finnish) 10 6454 0 0.001549
Total 1926 114272 46 0.01685

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.