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6:29911256 T / G

Warning! This variant is found in phase with 6-29911255-A-G in 2 individuals, altering its functional interpretation
.
Warning! This variant is found in phase with 6-29911255-A-T in 1 individuals, altering its functional interpretation
.
Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs78969666
Allele Frequency
0.8736
Filtering AF
0.9627 (East Asian)
Allele Count
100119 / 114602
UCSC
6-29911256-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 52946 62390 22435 0.8486
East Asian 8047 8206 3945 0.9806
Other 705 852 294 0.8275
African 8275 9072 3773 0.9121
Latino 10614 11396 4956 0.9314
South Asian 14883 16164 6859 0.9207
European (Finnish) 4649 6522 1680 0.7128
Total 100119 114602 43942 0.8736

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.