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6:30864829 T / C


Filter Status
PASS
dbSNP
rs116629156
Allele Frequency
0.4631
Filtering AF
0.639 (East Asian)
Allele Count
56163 / 121288
UCSC
6-30864829-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 25 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 25599 66680 4902 0.3839
East Asian 5636 8628 1826 0.6532
Other 375 908 79 0.413
African 4707 10406 1068 0.4523
Latino 7000 11566 2197 0.6052
South Asian 10321 16488 3311 0.626
European (Finnish) 2525 6612 503 0.3819
Total 56163 121288 13886 0.4631

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.