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6:31237835 A / T


Filter Status
PASS
dbSNP
rs182216723
Allele Frequency
0.00737
Filtering AF
0.03801 (African)
Allele Count
868 / 117776
UCSC
6-31237835-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 9 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 316 65392 1 0.004832
East Asian 0 8622 0 0
Other 8 854 0 0.009368
African 414 10026 14 0.04129
Latino 74 11516 0 0.006426
South Asian 41 14768 0 0.002776
European (Finnish) 15 6598 0 0.002273
Total 868 117776 15 0.00737

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.