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6:31322470 C / G


Filter Status
PASS
dbSNP
rs2442717
Allele Frequency
0.8466
Filtering AF
0.9119 (South Asian)
Allele Count
102707 / 121322
UCSC
6-31322470-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 54500 66684 22436 0.8173
East Asian 6969 8636 2802 0.807
Other 795 908 348 0.8756
African 9260 10402 4130 0.8902
Latino 10564 11572 4822 0.9129
South Asian 15258 16510 7071 0.9242
European (Finnish) 5361 6610 2192 0.811
Total 102707 121322 43801 0.8466

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.