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6:31323203 A / G


Filter Status
PASS
dbSNP
rs1050823
Allele Frequency
0.07341
Filtering AF
0.1817 (Latino)
Allele Count
8910 / 121374
UCSC
6-31323203-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 2 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4884 66730 19 0.07319
East Asian 619 8642 18 0.07163
Other 74 906 1 0.08168
African 437 10406 1 0.042
Latino 2177 11564 150 0.1883
South Asian 343 16512 3 0.02077
European (Finnish) 376 6614 5 0.05685
Total 8910 121374 197 0.07341

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.