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6:31324184 C / G

Note: This variant is multiallelic! The other alt alleles are:

Warning! This variant is only covered in 44512 individuals (adjusted allele number = 89024).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.

Filter Status
Allele Frequency
Filtering AF
0.1292 (South Asian)
Allele Count
4169 / 89024
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.


This variant falls on 8 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1616 50776 43 0.03183
East Asian 403 6664 6 0.06047
Other 37 606 0 0.06106
African 182 5580 6 0.03262
Latino 234 9000 7 0.026
South Asian 1552 11512 53 0.1348
European (Finnish) 145 4886 1 0.02968
Total 4169 89024 116 0.04683

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.