Interested in working on the development of this resource? Apply here.

6:31324643 G / C


Filter Status
PASS
dbSNP
rs1050517
Allele Frequency
0.3788
Filtering AF
0.4064 (Latino)
Allele Count
37461 / 98886
UCSC
6-31324643-G-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 21772 54072 6092 0.4026
East Asian 2049 6254 473 0.3276
Other 274 730 70 0.3753
African 2617 8278 596 0.3161
Latino 4101 9834 1059 0.417
South Asian 4834 14276 996 0.3386
European (Finnish) 1814 5442 383 0.3333
Total 37461 98886 9669 0.3788

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.