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6:32149260 C / T


Filter Status
PASS
dbSNP
rs2071288
Allele Frequency
0.01997
Filtering AF
0.103 (African)
Allele Count
2325 / 116436
UCSC
6-32149260-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 25 transcripts in 5 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 316 63424 1 0.004982
East Asian 336 8526 8 0.03941
Other 13 870 0 0.01494
African 1003 9234 52 0.1086
Latino 160 11472 2 0.01395
South Asian 493 16300 12 0.03025
European (Finnish) 4 6610 0 0.0006051
Total 2325 116436 75 0.01997

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.