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6:32800412 C / T


Filter Status
PASS
dbSNP
rs1800454
Allele Frequency
0.1437
Filtering AF
0.1889 (East Asian)
Allele Count
16696 / 116202
UCSC
6-32800412-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9177 63332 684 0.1449
East Asian 1673 8504 175 0.1967
Other 117 872 10 0.1342
African 1372 9164 115 0.1497
Latino 1995 11456 171 0.1741
South Asian 1429 16264 71 0.08786
European (Finnish) 933 6610 65 0.1411
Total 16696 116202 1291 0.1437

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.