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6:33037522 T / C


Filter Status
PASS
dbSNP
rs1042178
Allele Frequency
0.2467
Filtering AF
0.6604 (East Asian)
Allele Count
28646 / 116118
UCSC
6-33037522-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10433 63282 869 0.1649
East Asian 5732 8492 1942 0.675
Other 178 872 22 0.2041
African 4658 9156 1194 0.5087
Latino 1809 11450 155 0.158
South Asian 5187 16256 852 0.3191
European (Finnish) 649 6610 31 0.09818
Total 28646 116118 5065 0.2467

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.