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6:37180237 G / A


Warning! This variant is only covered in 5232 individuals (adjusted allele number = 10464).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs1224329
Allele Frequency
0.7873
Filtering AF
0.8028 (South Asian)
Allele Count
8238 / 10464
UCSC
6-37180237-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2243 3028 804 0.7408
East Asian 169 194 72 0.8711
Other 79 98 31 0.8061
African 331 556 100 0.5953
Latino 154 182 66 0.8462
South Asian 5260 6404 2137 0.8214
European (Finnish) 2 2 1 1
Total 8238 10464 3211 0.7873

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.