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6:46672943 A / G


Filter Status
PASS
dbSNP
rs1051931
Allele Frequency
0.8033
Filtering AF
0.8612 (East Asian)
Allele Count
97302 / 121122
UCSC
6-46672943-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 52782 66616 20922 0.7923
East Asian 7592 8650 3332 0.8777
Other 721 904 285 0.7976
African 7695 10394 2857 0.7403
Latino 9627 11456 4038 0.8403
South Asian 13884 16510 5856 0.8409
European (Finnish) 5001 6592 1884 0.7586
Total 97302 121122 39174 0.8033

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.