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6:54186147 T / C


Filter Status
PASS
dbSNP
rs1058768
Allele Frequency
0.6839
Filtering AF
0.8288 (East Asian)
Allele Count
82842 / 121136
UCSC
6-54186147-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 44306 66586 14767 0.6654
East Asian 7284 8620 3079 0.845
Other 639 906 227 0.7053
African 8310 10404 3322 0.7987
Latino 6955 11528 2083 0.6033
South Asian 10524 16490 3413 0.6382
European (Finnish) 4824 6602 1763 0.7307
Total 82842 121136 28654 0.6839

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.