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6:74331606 G / A


Filter Status
PASS
dbSNP
rs142553916
Allele Frequency
0.001164
Filtering AF
0.001609 (European (Non-Finnish))
Allele Count
141 / 121150
UCSC
6-74331606-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 2 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 125 66588 0 0.001877
East Asian 0 8642 0 0
Other 0 906 0 0
African 6 10344 0 0.00058
Latino 4 11548 0 0.0003464
South Asian 1 16510 0 6.057e-05
European (Finnish) 5 6612 0 0.0007562
Total 141 121150 0 0.001164

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.