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6:86256830 C / A


Filter Status
PASS
dbSNP
rs201128942
Allele Frequency
2.741e-05
Filtering AF
1.3e-05 (European (Non-Finnish))
Allele Count
3 / 109442
UCSC
6-86256830-C-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3 59168 0 5.07e-05
East Asian 0 7654 0 0
Other 0 856 0 0
African 0 9506 0 0
Latino 0 10962 0 0
South Asian 0 14912 0 0
European (Finnish) 0 6384 0 0
Total 3 109442 0 2.741e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.