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6:99365567 T / C


Filter Status
PASS
dbSNP
rs150748757
Allele Frequency
0.0002558
Filtering AF
0.000265 (European (Non-Finnish))
Allele Count
30 / 117298
UCSC
6-99365567-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 25 65462 0 0.0003819
East Asian 0 8614 0 0
Other 1 882 0 0.001134
African 1 10148 0 9.854e-05
Latino 0 11462 0 0
South Asian 3 14130 0 0.0002123
European (Finnish) 0 6600 0 0
Total 30 117298 0 0.0002558

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.