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7:117175372 A / G


Filter Status
PASS
dbSNP
rs121909046
Allele Frequency
0.003921
Filtering AF
0.008561 (East Asian)
Allele Count
476 / 121392
UCSC
7-117175372-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 138 66732 1 0.002068
East Asian 89 8652 1 0.01029
Other 22 908 1 0.02423
African 0 10406 0 0
Latino 1 11570 0 8.643e-05
South Asian 14 16512 1 0.0008479
European (Finnish) 212 6612 7 0.03206
Total 476 121392 11 0.003921

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.