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7:138455988 A / G

Note: This variant is found in phase with 7-138455987-C-T in 3 individuals.

Filter Status
PASS
dbSNP
rs10258719
Allele Frequency
0.704
Filtering AF
0.763 (South Asian)
Allele Count
85462 / 121398
UCSC
7-138455988-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 48896 66738 18014 0.7327
East Asian 4223 8648 1053 0.4883
Other 653 908 238 0.7192
African 7759 10406 2881 0.7456
Latino 6154 11574 1718 0.5317
South Asian 12784 16512 4977 0.7742
European (Finnish) 4993 6612 1895 0.7551
Total 85462 121398 30776 0.704

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.