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7:141672604 T / C

Note: This variant is found in phase with 7-141672602-G-A in 1 individuals.

Filter Status
PASS
dbSNP
rs10246939
Allele Frequency
0.4761
Filtering AF
0.6834 (Latino)
Allele Count
57722 / 121238
UCSC
7-141672604-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 2 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 29965 66652 6785 0.4496
East Asian 5797 8628 1979 0.6719
Other 408 908 92 0.4493
African 5004 10388 1170 0.4817
Latino 8041 11552 2838 0.6961
South Asian 6072 16506 1150 0.3679
European (Finnish) 2435 6604 463 0.3687
Total 57722 121238 14477 0.4761

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.