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7:142458451 A / T


Filter Status
InbreedingCoeff_Filter
dbSNP
rs111033566
Allele Frequency
0.4751
Filtering AF
0.4821 (South Asian)
Allele Count
56786 / 119522
UCSC
7-142458451-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 31085 65710 0 0.4731
East Asian 4146 8574 0 0.4836
Other 416 892 0 0.4664
African 4299 9998 0 0.43
Latino 5621 11502 0 0.4887
South Asian 8035 16362 0 0.4911
European (Finnish) 3184 6484 0 0.4911
Total 56786 119522 0 0.4751

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.