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7:65547427 C / T


Warning! This variant is only covered in 47317 individuals (adjusted allele number = 94634).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs374304304
Allele Frequency
2.113e-05
Filtering AF
6e-06 (European (Non-Finnish))
Allele Count
2 / 94634
UCSC
7-65547427-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2 54544 0 3.667e-05
East Asian 0 7016 0 0
Other 0 650 0 0
African 0 8376 0 0
Latino 0 7334 0 0
South Asian 0 12850 0 0
European (Finnish) 0 3864 0 0
Total 2 94634 0 2.113e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.