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7:75615006 C / T

Warning! This variant is found in phase with 7-75615005-G-C in 1 individuals, altering its functional interpretation
.

Warning! This variant is only covered in 32564 individuals (adjusted allele number = 65128).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs1057868
Allele Frequency
0.3639
Filtering AF
0.4319 (East Asian)
Allele Count
23700 / 65128
UCSC
7-75615006-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12929 36398 1728 0.3552
East Asian 2278 5094 418 0.4472
Other 165 442 32 0.3733
African 1075 4722 101 0.2277
Latino 1993 5364 241 0.3716
South Asian 4280 11120 780 0.3849
European (Finnish) 980 1988 175 0.493
Total 23700 65128 3475 0.3639

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.