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7:87138645 A / G


Filter Status
PASS
dbSNP
rs1045642
Allele Frequency
0.5034
Filtering AF
0.7837 (African)
Allele Count
61100 / 121366
UCSC
7-87138645-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 31490 66732 7599 0.4719
East Asian 5391 8632 1695 0.6245
Other 444 908 107 0.489
African 8304 10406 3321 0.798
Latino 6324 11568 1734 0.5467
South Asian 6573 16512 1385 0.3981
European (Finnish) 2574 6608 521 0.3895
Total 61100 121366 16362 0.5034

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.