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7:87165750 C / T


Filter Status
PASS
dbSNP
rs2235040
Allele Frequency
0.1186
Filtering AF
0.1507 (African)
Allele Count
14360 / 121068
UCSC
7-87165750-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8137 66582 529 0.1222
East Asian 461 8624 24 0.05346
Other 106 908 5 0.1167
African 1633 10398 129 0.157
Latino 1120 11474 52 0.09761
South Asian 2558 16488 236 0.1551
European (Finnish) 345 6594 11 0.05232
Total 14360 121068 986 0.1186

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.