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7:87179601 A / G


Filter Status
PASS
dbSNP
rs1128503
Allele Frequency
0.5419
Filtering AF
0.7917 (African)
Allele Count
65715 / 121266
UCSC
7-87179601-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 38174 66672 10913 0.5726
East Asian 3095 8622 554 0.359
Other 461 908 121 0.5077
African 8381 10396 3364 0.8062
Latino 5737 11556 1428 0.4965
South Asian 6490 16506 1326 0.3932
European (Finnish) 3377 6606 871 0.5112
Total 65715 121266 18577 0.5419

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.