Interested in working on the development of this resource? Apply here.

7:87229501 T / C


Filter Status
PASS
dbSNP
rs2214102
Allele Frequency
0.9445
Filtering AF
0.9823 (East Asian)
Allele Count
114421 / 121140
UCSC
7-87229501-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 61020 66540 27979 0.917
East Asian 8649 8650 4324 0.9999
Other 856 902 407 0.949
African 10255 10400 5057 0.9861
Latino 11334 11560 5556 0.9804
South Asian 16281 16480 8045 0.9879
European (Finnish) 6026 6608 2742 0.9119
Total 114421 121140 54110 0.9445

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.