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7:94027699 T / C


Warning! This variant is only covered in 18317 individuals (adjusted allele number = 36634).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs1801182
Allele Frequency
0.1329
Filtering AF
0.4592 (East Asian)
Allele Count
4868 / 36634
UCSC
7-94027699-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 393 14788 0 0.02658
East Asian 1555 3246 264 0.4791
Other 30 314 1 0.09554
African 1633 4024 268 0.4058
Latino 529 3976 16 0.133
South Asian 625 8844 20 0.07067
European (Finnish) 103 1442 0 0.07143
Total 4868 36634 569 0.1329

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.