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7:94937446 T / C


Filter Status
PASS
dbSNP
rs662
Allele Frequency
0.377
Filtering AF
0.6591 (African)
Allele Count
45735 / 121298
UCSC
7-94937446-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 18598 66680 2639 0.2789
East Asian 5704 8624 1874 0.6614
Other 287 908 47 0.3161
African 6996 10406 2340 0.6723
Latino 5902 11558 1545 0.5106
South Asian 6373 16510 1284 0.386
European (Finnish) 1875 6612 256 0.2836
Total 45735 121298 9985 0.377

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.