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7:94946084 A / T


Filter Status
PASS
dbSNP
rs854560
Allele Frequency
0.2913
Filtering AF
0.3693 (European (Non-Finnish))
Allele Count
35353 / 121374
UCSC
7-94946084-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 24903 66724 4704 0.3732
East Asian 316 8652 5 0.03652
Other 298 908 38 0.3282
African 1817 10396 161 0.1748
Latino 2227 11574 275 0.1924
South Asian 3454 16508 398 0.2092
European (Finnish) 2338 6612 419 0.3536
Total 35353 121374 6000 0.2913

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.