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7:99270222 G / T


Filter Status
PASS
dbSNP
rs41279857
Allele Frequency
0.00159
Filtering AF
0.001606 (European (Non-Finnish))
Allele Count
193 / 121394
UCSC
7-99270222-G-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 125 66728 0 0.001873
East Asian 0 8654 0 0
Other 1 908 0 0.001101
African 4 10406 0 0.0003844
Latino 19 11578 0 0.001641
South Asian 0 16506 0 0
European (Finnish) 44 6614 0 0.006653
Total 193 121394 0 0.00159

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.