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8:87645092 C / T


Filter Status
PASS
dbSNP
rs147876778
Allele Frequency
0.005113
Filtering AF
0.02596 (South Asian)
Allele Count
618 / 120874
UCSC
8-87645092-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 122 66504 0 0.001834
East Asian 16 8598 0 0.001861
Other 4 902 0 0.004435
African 6 10342 1 0.0005802
Latino 6 11444 0 0.0005243
South Asian 463 16492 12 0.02807
European (Finnish) 1 6592 0 0.0001517
Total 618 120874 13 0.005113

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.