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9:101340316 T / C


Filter Status
PASS
dbSNP
rs3750344
Allele Frequency
0.1686
Filtering AF
0.2241 (African)
Allele Count
20460 / 121366
UCSC
9-101340316-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12492 66726 1190 0.1872
East Asian 1297 8638 114 0.1502
Other 171 908 18 0.1883
African 2412 10404 280 0.2318
Latino 853 11568 30 0.07374
South Asian 1949 16508 132 0.1181
European (Finnish) 1286 6614 109 0.1944
Total 20460 121366 1873 0.1686

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.