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9:132585058 G / A


Filter Status
PASS
dbSNP
rs2296793
Allele Frequency
0.2275
Filtering AF
0.238 (European (Non-Finnish))
Allele Count
27612 / 121388
UCSC
9-132585058-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 2 genes:

non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 16087 66726 1911 0.2411
East Asian 1794 8650 192 0.2074
Other 218 908 25 0.2401
African 2307 10404 254 0.2217
Latino 2057 11576 191 0.1777
South Asian 3548 16512 396 0.2149
European (Finnish) 1601 6612 207 0.2421
Total 27612 121388 3176 0.2275

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.