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9:135139901 T / C


Filter Status
PASS
dbSNP
rs1056899
Allele Frequency
0.3926
Filtering AF
0.7392 (African)
Allele Count
47605 / 121252
UCSC
9-135139901-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 20213 66662 3090 0.3032
East Asian 6326 8630 2340 0.733
Other 343 906 62 0.3786
African 7822 10386 2948 0.7531
Latino 3595 11558 597 0.311
South Asian 7300 16508 1666 0.4422
European (Finnish) 2006 6602 315 0.3038
Total 47605 121252 11018 0.3926

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.