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9:139912484 A / G


Filter Status
PASS
dbSNP
rs908832
Allele Frequency
0.9732
Filtering AF
0.9781 (East Asian)
Allele Count
116026 / 119222
UCSC
9-139912484-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 15 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 63597 65480 30892 0.9712
East Asian 8565 8602 4265 0.9957
Other 864 880 424 0.9818
African 9064 9642 4258 0.9401
Latino 11434 11532 5670 0.9915
South Asian 16121 16502 7880 0.9769
European (Finnish) 6381 6584 3093 0.9692
Total 116026 119222 56482 0.9732

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.