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9:21971199 C / G


Warning! This variant is only covered in 41826 individuals (adjusted allele number = 83652).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs104894095
Allele Frequency
2.391e-05
Filtering AF
0 (None)
Allele Count
2 / 83652
UCSC
9-21971199-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 45776 0 2.185e-05
East Asian 0 6042 0 0
Other 0 586 0 0
African 1 5246 0 0.0001906
Latino 0 8736 0 0
South Asian 0 13636 0 0
European (Finnish) 0 3630 0 0
Total 2 83652 0 2.391e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.