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9:34648823 A / C


Filter Status
VQSRTrancheSNP99.80to99.90
dbSNP
rs111033755
Allele Frequency
8.243e-06
Filtering AF
0 (None)
Allele Count
1 / 121310
UCSC
9-34648823-A-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 66692 0 1.499e-05
East Asian 0 8652 0 0
Other 0 908 0 0
African 0 10356 0 0
Latino 0 11576 0 0
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 1 121310 0 8.243e-06

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.