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9:71865932 G / A


Filter Status
PASS
dbSNP
rs2282335
Allele Frequency
0.3704
Filtering AF
0.4429 (African)
Allele Count
44365 / 119768
UCSC
9-71865932-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 25863 65936 5061 0.3922
East Asian 1460 8516 115 0.1714
Other 341 894 66 0.3814
African 4483 9874 993 0.454
Latino 2078 11494 200 0.1808
South Asian 7027 16462 1552 0.4269
European (Finnish) 3113 6592 746 0.4722
Total 44365 119768 8733 0.3704

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.