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9:98997810 C / T


Filter Status
PASS
dbSNP
rs2066479
Allele Frequency
0.07306
Filtering AF
0.2126 (East Asian)
Allele Count
8684 / 118866
UCSC
9-98997810-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3498 65744 116 0.05321
East Asian 1893 8570 198 0.2209
Other 67 872 1 0.07683
African 1123 10160 60 0.1105
Latino 548 11346 13 0.0483
South Asian 1258 15928 59 0.07898
European (Finnish) 297 6246 8 0.04755
Total 8684 118866 455 0.07306

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.