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X:103031893 C / T


Warning! This variant is only covered in 39792 individuals (adjusted allele number = 79585).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs2233695
Allele Frequency
0.003468
Filtering AF
0.01719 (East Asian)
Allele Count
276 / 79585
UCSC
X-103031893-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 16 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Hemizygotes Allele Frequency
European (Non-Finnish) 12 43677 0 2 0.0002747
East Asian 121 6019 1 29 0.0201
Other 2 569 0 1 0.003515
African 0 7969 0 0 0
Latino 122 8714 0 18 0.014
South Asian 9 8576 0 6 0.001049
European (Finnish) 10 4061 0 5 0.002462
Total 276 79585 1 61 0.003468

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.