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X:153284192 A / G


Warning! This variant is only covered in 42028 individuals (adjusted allele number = 84056).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs1059702
Allele Frequency
0.7504
Filtering AF
0.9392 (African)
Allele Count
63078 / 84056
UCSC
X-153284192-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Hemizygotes Allele Frequency
European (Non-Finnish) 40270 46532 10607 15484 0.8654
East Asian 1533 6059 132 437 0.253
Other 457 607 98 194 0.7529
African 8028 8391 2993 1760 0.9567
Latino 4527 8764 863 1041 0.5165
South Asian 4444 9273 338 2883 0.4792
European (Finnish) 3819 4430 879 1750 0.8621
Total 63078 84056 15910 23549 0.7504

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.