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X:153762653 G / A


Warning! This variant is only covered in 43688 individuals (adjusted allele number = 87377).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs267606836
Allele Frequency
1.144e-05
Filtering AF
0 (None)
Allele Count
1 / 87377
UCSC
X-153762653-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Hemizygotes Allele Frequency
European (Non-Finnish) 0 47782 0 0 0
East Asian 1 6631 0 1 0.0001508
Other 0 622 0 0 0
African 0 8488 0 0 0
Latino 0 9297 0 0 0
South Asian 0 10102 0 0 0
European (Finnish) 0 4455 0 0 0
Total 1 87377 0 1 1.144e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.