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X:153762680 A / G


Warning! This variant is only covered in 43624 individuals (adjusted allele number = 87249).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs137852343
Allele Frequency
1.146e-05
Filtering AF
0 (None)
Allele Count
1 / 87249
UCSC
X-153762680-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Hemizygotes Allele Frequency
European (Non-Finnish) 0 47705 0 0 0
East Asian 1 6631 0 0 0.0001508
Other 0 620 0 0 0
African 0 8477 0 0 0
Latino 0 9294 0 0 0
South Asian 0 10091 0 0 0
European (Finnish) 0 4431 0 0 0
Total 1 87249 0 0 1.146e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.