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X:66766162 C / T


Warning! This variant is only covered in 17228 individuals (adjusted allele number = 34457).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs201934623
Allele Frequency
0.008039
Filtering AF
0.02814 (South Asian)
Allele Count
277 / 34457
UCSC
X-66766162-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Number of Hemizygotes Allele Frequency
European (Non-Finnish) 72 17416 0 16 0.004134
East Asian 1 2683 0 0 0.0003727
Other 3 234 0 2 0.01282
African 1 2852 0 1 0.0003506
Latino 7 4121 0 1 0.001699
South Asian 193 6067 1 110 0.03181
European (Finnish) 0 1084 0 0 0
Total 277 34457 1 130 0.008039

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.